Cellular response to prostaglandin stimulus

pathway activity — cross-omics
GO:0071379Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Cellular response to prostaglandin stimulus pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are ST6GALNAC1, GULP1, and AKR1C2, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Cellular response to prostaglandin stimulus activity versus ST6GALNAC1 in BRCA (Pearson r = 0.08).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAST6GALNAC1 →+0.833+0.288.002.00734
UCECGULP1 →+0.779+0.236.001<.00133
LSCCAKR1C2 →+2.382+0.228.001<.00133
UCECMAPK6P3 →+0.784+0.300<.001<.00133
PDACPKHD1 →-1.164-0.502.002.00333
OVADH1B →+1.721+0.149.004.00633
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0071379 vs ST6GALNAC1 — BRCA

Per-sample scatter of Cellular response to prostaglandin stimulus activity vs ST6GALNAC1 in BRCA.

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Exploration