Cellular response to inorganic substance

pathway activity — cross-omics
GO:0071241Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Cellular response to inorganic substance pathway is significantly associated with the protein abundance of multiple proteins, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are FBL, HNRNPR, and CNBP, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVFBL →-0.308-0.015.006.00937
GBMHNRNPR →-0.332-0.039<.001<.00137
LSCCCNBP →-0.257-0.024<.001<.00136
PDACMAP1B_S1915 →+0.603+0.020.006.00336
BRCARSU1 →+0.303+0.024.001<.00136
GBMSF3A1 →-0.266-0.036<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration