Regulation of protein exit from endoplasmic reticulum

Across TCGA cell cohorts, RNA activity of the Regulation of protein exit from endoplasmic reticulum pathway is significantly associated with the RNA expression of multiple genes, with the LIVER cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are ZNF23, FAM126A, and THOC7, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, ZNF23 grouped by Regulation of protein exit from endoplasmic reticulum-low versus -high activity in LIVER.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LIVER	ZNF23 →	-0.748	-0.357	<.001	.002	3	7
CNS	FAM126A →	-0.870	-0.211	<.001	<.001	3	5
CNS	THOC7 →	-0.443	-0.171	.001	.005	3	5
LUNG_NSCLC_LUSC	PLIN3 →	-1.817	-0.220	.006	.005	3	5
LUNG_NSCLC_LUSC	TBC1D30 →	+1.515	+0.194	<.001	.007	3	5
LUNG_NSCLC_LUSC	MNX1 →	+1.571	+0.249	.001	.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

ZNF23 by Regulation of protein exit from endoplasmic reticulum activity — LIVER

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