Obsolete mitochondrion morphogenesis

pathway activity — cross-omics
GO:0070584Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Obsolete mitochondrion morphogenesis pathway is significantly associated with the RNA expression of multiple genes, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are IGFL2, RRAS, and TMBIM1, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCIGFL2 →+0.941+0.328<.001.00136
GBMRRAS →+0.465+0.181.004.00735
GBMTMBIM1 →+0.507+0.242.001<.00135
BRCAGPR68 →+0.713+0.254.004.00335
LSCCADAMTS12 →+0.838+0.323<.001<.00135
BRCAPLEC →+0.794+0.270.003.00226
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration