Negative regulation of interleukin-6-mediated signaling pathway

pathway activity — cross-omics
GO:0070104Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Negative regulation of interleukin-6-mediated signaling pathway pathway is significantly associated with the RNA expression of multiple genes, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MIR924HG, NDC80, and NALCN, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADMIR924HG →+0.827+0.117.004.00535
BRCANDC80 →+1.410+0.808<.001.00135
GBMNALCN →-0.765-0.320.009.00635
LSCCCEP76 →+1.093+0.287<.001<.00134
LSCCSTMN1 →+1.099+0.243<.001<.00134
CCRCCPLK4 →+0.852+1.028.005.00334
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration