Ganglion development

pathway activity — tumor vs normal
GO:0061548Tumor vs NormalRNA activityBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RNA activity of the Ganglion development pathway differs between tumor and matched normal tissue in 7 of the 18 cancer types tested.

The strongest signal is observed in thyroid carcinoma (THCA), where pathway activity is higher in tumor tissue than in matched normal tissue. In most cancer types, this pathway shows higher activity in tumors, although a few cancer types, such as KIRP and UCEC, show the opposite pattern, with lower activity in tumor tissue.

THCA, LUAD, and HNSC show the most reproducible tumor–normal differences in pathway activity.

Tumor vs normal pathway activity by lineage

Ranked by sampling consensus. Activity change represents the tumor-versus-normal difference in pathway activity on a log2 scale. Positive values indicate higher pathway activity in tumor tissue. The reported p-values are derived from the corresponding differential activity tests.
LineageGenderStageActivity changepSampling consensus
THCAFemaleAll+0.073<.0019view →
LUADAllII,III,IV+0.064<.0018view →
HNSCMaleII,III,IV+0.048<.0016view →
KIRCAllAll+0.025.0045view →
KIRPAllAll−0.024.0024view →
UCECAllAll−0.036.0362view →
LUSCAllAll+0.022.0262view →
Pink = more active in tumor, green = less active in tumor. Showing the 7 strongest of 7 lineages.

GO:0061548–THCA

Tumor-vs-normal pathway-activity box plot for Ganglion development in THCA.

Open the THCA breakdown →

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