Cell surface receptor signaling pathway involved in heart development

pathway activity — cross-omics
GO:0061311Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Cell surface receptor signaling pathway involved in heart development pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CAMK2D, CCSER2, and JAG1, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCAMK2D →+0.551+0.785.002.00834
BRCACCSER2 →+0.398+0.618.001<.00134
LSCCJAG1 →+0.866+0.931.007<.00134
PDACPEX5L →-0.294-0.391<.001.00633
PDACFLT3 →-0.714-0.392<.001.00424
PDACCTDSPL →+0.310+0.372.007.00333
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

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