Positive regulation of cell growth involved in cardiac muscle cell development

pathway activity — cross-omics
GO:0061051Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of cell growth involved in cardiac muscle cell development pathway is significantly associated with the RNA expression of multiple genes, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are NGDN, GINS2, and LINC00618, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of cell growth involved in cardiac muscle cell development activity versus NGDN in LSCC (Pearson r = 0.31).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCNGDN →+0.538+0.223<.001<.00134
LSCCGINS2 →+0.659+0.182.001.00134
LSCCLINC00618 →+0.625+0.215.002<.00134
LSCCGEMIN2 →+0.456+0.187.002.00834
UCECCCDC58 →+0.527+0.613.004<.00134
UCECTRAIP →+0.658+0.519.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0061051 vs NGDN — LSCC

Per-sample scatter of Positive regulation of cell growth involved in cardiac muscle cell development activity vs NGDN in LSCC.

Explore this scatter interactively →

Exploration