Regulation of vascular wound healing

pathway activity — cross-omics
GO:0061043Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of vascular wound healing pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are WAS, SORBS3, and TLN1_S2040, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of vascular wound healing activity versus WAS in GBM (Pearson r = 0.64).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMWAS →+0.725+0.120<.001<.00138
UCECSORBS3 →+0.524+0.097<.001.00237
UCECTLN1_S2040 →+0.698+0.084.002<.00137
BRCACOL14A1 →+0.739+0.065.005.00328
UCECHAAO →+0.408+0.070.008.00437
BRCARPL5 →-0.174-0.055.002<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0061043 vs WAS — GBM

Per-sample scatter of Regulation of vascular wound healing activity vs WAS in GBM.

Explore this scatter interactively →

Exploration