Common bile duct development

pathway activity — cross-omics
GO:0061009Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Common bile duct development pathway is significantly associated with the RNA expression of multiple genes, with the PDAC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are TRAV25, OTULINL, and RGMA, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACTRAV25 →-0.473-0.628.002.00834
GBMOTULINL →-0.605-0.259<.001.00134
LSCCRGMA →+0.792+0.162.001.00234
HNSCRPS3AP46 →+0.757+0.264.004.00833
HNSCTMEM183AP1 →+0.286+0.244.008.00333
UCECGPR15 →-0.665-0.716.004<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration