Fat pad development

pathway activity — cross-omics
GO:0060613Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Fat pad development pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are PVT1, SERPINH1, and TUBB6, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPVT1 →+0.550+0.414.001.00335
LUADSERPINH1 →+0.413+0.200.001<.00134
LUADTUBB6 →+0.453+0.261.002<.00134
LUADATP6AP1L →+0.601+0.338<.001<.00134
CCRCCCLEC5A →+0.692+0.553<.001<.00134
OVSMPD3 →-0.464-0.432.008.00634
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration