Lobar bronchus epithelium development

pathway activity — cross-omics
GO:0060481Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Lobar bronchus epithelium development pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are SERPINA11, HMGB1P41, and CIB1, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCASERPINA11 →+1.569+0.200<.001.00725
HNSCHMGB1P41 →+0.986+0.902.003.00234
OVCIB1 →+0.715+1.516.002.00933
GBMGAMT →+0.759+0.203.001.00133
LUADTSPAN8 →+1.270+0.284.007.00733
LUADSYT13 →+1.410+0.330.003.00833
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration