Bud elongation involved in lung branching

pathway activity — cross-omics
GO:0060449Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Bud elongation involved in lung branching pathway is significantly associated with the RNA expression of multiple genes, with the PDAC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are PMP22, PTS, and PTPN14, each associated with the pathway in up to 3 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACPMP22 →+0.335+0.156.006.00533
PDACPTS →+0.344+0.218<.001<.00133
PDACPTPN14 →+0.465+0.169.004.00333
PDACRAB26 →-0.414-0.180<.001.00133
PDACTRBV5-6 →-0.497-0.107.009.00833
PDACLINC02024 →-0.376-0.143.006.00433
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

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