TRBV5-6

associated omics data
T cell receptor beta variable 5-6Genealiases: TCRBV5S2 · TCRBV5S6 · TRBV56

Q-omics provides the consensus-scored TRBV5-6 profile across patient tissues and cancer cell-line models. TRBV5-6 expression is associated with patient survival in 20 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, TRBV5-6 is differentially expressed in 7, with the highest sampling consensus in KIRC. Additionally, TRBV5-6 RNA expression shows 16,315 significant protein co-abundance associations, with the highest sampling consensus in LSCC. Together, these results highlight HNSC, KIRC, and LSCC as cancer lineages where TRBV5-6 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes TRBV5-6 survival associations across molecular data types. TRBV5-6 RNA expression shows survival associations in the most cancer types (20). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
TRBV5-6 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier20HNSC (112)view →
This table ranks reproducible TRBV5-6 RNA expression–survival associations across cancer types. High TRBV5-6 expression shows unfavorable associations in LGG, but favorable associations in HNSC, SKCM, LUAD, BRCA and LIHC. The HNSC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify HNSC as the clearest survival context for TRBV5-6 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianAll0.7520.639<.001112view →
SKCMOSMedianAll0.4150.267<.00190view →
LUADOSTertileII,III,IV0.8800.639.00153view →
LGGOSTertileAll0.3200.501<.00139view →
BRCADFSTertileAll0.6050.489.00234view →
LIHCDFSTertileAll0.4490.231.00128view →
Pink = unfavorable, green = favorable. all 20 lineages →

TRBV5-6-HNSC (DFS)

Kaplan–Meier survival curve for TRBV5-6 RNA expression in HNSC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes TRBV5-6 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 7. The strongest signals are observed in KIRC for RNA.
TRBV5-6 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot7KIRC (12)view →
This table ranks reproducible tumor–normal expression differences for TRBV5-6. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. TRBV5-6 shows lower tumor expression in COAD, LUSC and UCEC and higher tumor expression in KIRC, BRCA and ESCA. The KIRC box plot shows higher TRBV5-6 RNA expression in tumor versus normal tissue (log2 FC = +1.275, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRCFemaleAll+1.275<.00112view →
COADAllII,III,IV−0.541<.0018view →
LUSCAllAll−0.519<.0014view →
UCECAllIV−0.435.0034view →
BRCAAllII,III,IV+0.380<.0014view →
ESCAMaleAll+0.906.0173view →
Green = repressed in tumor. all 7 lineages →

TRBV5-6-KIRC

Tumor-vs-normal expression box plot for TRBV5-6 in KIRC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with TRBV5-6 in patient tissues and cancer cell lines. In patient samples, TRBV5-6 shows the broadest associations at the RNA and protein expression levels, with LSCC recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Protein (mass-spec)16,315LSCC (5550)view →
RNA14,459TGCT (4533)view →