Bronchiole development

pathway activity — cross-omics
GO:0060435Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Bronchiole development pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are LOXL2, MXRA5, and TNFRSF12A, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCALOXL2 →+1.512+1.081<.001<.00136
LSCCMXRA5 →+0.959+0.724.001.00335
HNSCTNFRSF12A →+1.235+0.136<.001.00135
BRCAMRC2 →+1.207+0.960.006.00534
BRCAPLAUR →+1.286+1.188<.001<.00134
BRCAFN1 →+1.514+0.940<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration