Elastin catabolic process

pathway activity & survival
GO:0060309SurvivalRNA activityKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, RNA activity of the Elastin catabolic process pathway is associated with patient survival in 25 of 34 cancer lineages. Pathway activity is summarized from the expression of its 5 member genes.

The strongest signal is observed in uveal melanoma (UVM), where higher Elastin catabolic process pathway activity is associated with better overall survival. In most high-consensus cancer types, elevated pathway activity shows an unfavorable survival association, although some cancer types, such as UVM and ACC, show the opposite pattern, with higher activity associated with better survival.

UVM, ACC, and LUSC are the cancer lineages in which this pathway most reproducibly stratifies patient survival.

Pathway-activity survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 represent the survival AUCs for the high- and low-pathway-activity groups, respectively. The group with the lower AUC is interpreted as having poorer survival. The reported p-values are derived from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
UVMOSQuartileAll0.7330.297<.00184view →
ACCDFSTertileIII,IV0.6860.204.00264view →
LUSCDFSQuartileAll0.4640.777<.00150view →
LUADDFSTertileIII,IV0.6470.252.00241view →
SARCOSQuartileAll0.9110.582<.00130view →
KIRPOSTertileIII,IV0.5900.264.01628view →
UCECDFSMedianIV0.2180.695.00122view →
UCSDFSMedianIII,IV0.5740.268.01320view →
ESCAOSMedianAll0.6070.773.01115view →
SKCMOSTertileIV1.0000.253.01114view →
CHOLDFSMedianAll0.2030.636.01611view →
PAADDFSMedianAll0.4560.262.01110view →
Pink = unfavorable, green = favorable. Showing the 12 strongest of 25 lineages.

Exploration