Convergent extension involved in axis elongation

pathway activity — cross-omics
GO:0060028Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Convergent extension involved in axis elongation pathway is significantly associated with the protein abundance of multiple proteins, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are SFRP2, SFRP1, and CLINT1, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVSFRP2 →+1.343+0.104<.001<.00136
OVSFRP1 →+1.084+0.119<.001<.00136
UCECCLINT1 →-0.271-0.124<.001<.00136
OVCNN2 →+0.767+0.093<.001<.00136
OVCOL5A1 →+0.670+0.076<.001<.00136
OVCTHRC1 →+1.024+0.090<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

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