Convergent extension

pathway activity — cross-omics
GO:0060026Cross-omicsPROTEIN-MS → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Convergent extension pathway is significantly associated with the protein abundance of multiple proteins, with the PDAC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are CFD, EPS8_S55, and MAF1_S214, each associated with the pathway in up to 3 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACCFD →+0.419+0.317<.001.00533
OVEPS8_S55 →+0.690+0.768<.001<.00133
UCECMAF1_S214 →+0.760+0.807<.001.00233
OVMAP1B_S1501 →+1.477+0.718<.001<.00133
OVMARF1_S716 →-1.164-0.688<.001<.00133
GBMOLFML1 →+0.824+0.994<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration