Nitric-oxide synthase biosynthetic process

pathway activity — cross-omics
GO:0051767Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Nitric-oxide synthase biosynthetic process pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are SPARCL1_S198, TNS2, and CSE1L, each associated with the pathway in up to 10 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCASPARCL1_S198 →+0.994+0.050<.001<.001310
BRCATNS2 →+0.485+0.049<.001.001310
LSCCCSE1L →-0.452-0.112<.001<.001310
GBMENG →+0.406+0.086.002.003310
BRCAKANK3 →+0.609+0.057<.001<.001310
OVMAIP1 →-0.439-0.053.003.002310
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration