Nitric-oxide synthase biosynthetic process

pathway activity — cross-omics
GO:0051767Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Nitric-oxide synthase biosynthetic process pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are AKAP12, SCN7A, and MGP, each associated with the pathway in up to 10 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVAKAP12 →+1.474+0.920<.001<.001310
UCECSCN7A →+1.173+0.529<.001.00239
UCECMGP →+1.619+0.554<.001.00138
LSCCC7 →+1.826+0.988<.001<.00138
PDACFBLN5 →+0.899+0.650<.001<.00138
HNSCABCA8 →+0.997+1.017<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration