Regulation of killing of cells of another organism

pathway activity — cross-omics
GO:0051709Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of killing of cells of another organism pathway is significantly associated with the protein abundance of multiple proteins, with the HNSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are CASP4, STK10, and STK4, each associated with the pathway in up to 9 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCCASP4 →+0.678+0.096<.001<.00139
GBMSTK10 →+0.439+0.146<.001<.00138
CCRCCSTK4 →+0.326+0.118<.001<.00138
BRCATHEMIS2 →+0.420+0.056<.001<.00138
GBMTNFAIP8L2 →+0.616+0.134<.001<.00138
GBMVAV1 →+0.526+0.138<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration