Obsolete histone H3-K9 methylation

pathway activity — cross-omics
GO:0051567Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Obsolete histone H3-K9 methylation pathway is significantly associated with the protein abundance of multiple proteins, with the COAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are BRD3, ERO1A, and TRAF2, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADBRD3 →+0.251+0.031.007.00537
LSCCERO1A →-0.483-0.043<.001.00237
BRCATRAF2 →+0.262+0.041.005<.00135
BRCACIAO2B →-0.215-0.042.006<.00135
LSCCKNOP1 →-0.382-0.037.001.00735
BRCALARP4B_S664 →-0.424-0.035.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration