Obsolete histone H3-K9 methylation

pathway activity — cross-omics
GO:0051567Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Obsolete histone H3-K9 methylation pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CTBP2, MIR4795, and LEKR1, each associated with the pathway in up to 3 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVCTBP2 →+0.412+0.632<.001.00333
LUADMIR4795 →+0.501+0.667<.001<.00133
UCECLEKR1 →-0.539-0.430.002.00132
PDACENSA →-0.176-0.388.005.00432
PDACSNORD114-4 →+0.593+0.599.002<.00123
LSCCCSNK1A1P1 →-0.378-0.680.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

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