Microtubule nucleation by microtubule organizing center

pathway activity — cross-omics
GO:0051418Cross-omicsSHRNA → SHRNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Microtubule nucleation by microtubule organizing center pathway is significantly associated with the shRNA dependency of multiple genes, with the LUNG_NSCLC_LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CENPJ, IL34, and KRI1, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADCENPJ →-0.232-0.280<.001<.00138
SKINIL34 →+0.264+0.287<.001<.00134
SOFT_TISSUEKRI1 →+0.307+0.209.007.00534
OESOPHAGUSTKT →+0.287+0.241.009.00334
LIVERMRPS12 →+0.245+0.355.005.00433
LIVERATP23 →+0.325+0.355.005.00433
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration