Negative regulation of nitric-oxide synthase activity

pathway activity — cross-omics
GO:0051001Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Negative regulation of nitric-oxide synthase activity pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are TRAIP, RPS10P5, and AFDN-DT, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMTRAIP →-0.745-0.292<.001<.00134
BRCARPS10P5 →-0.608-0.114.002.00834
BRCAAFDN-DT →-0.329-0.080.002.00733
PDACERV3-1 →-0.646-0.170.001<.00133
PDACKLF3P2 →-0.229-0.095.004.00833
LSCCSET →-0.397-0.166.002.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration