Collateral sprouting in absence of injury

associated omics data
GO:0048669Ontology (GO BP)GO biological process · ~5 member genes

Q-omics provides the Collateral sprouting in absence of injury (GO:0048669) pathway profile, scoring each patient from the combined activity of its roughly 5 member genes. Pathway activity is associated with patient survival in 20 of 34 cancer types, with the highest sampling consensus in UVM. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 15, with the highest sampling consensus in COAD. Additionally, pathway RNA activity shows 30,320 significant cross-omics associations, again with the highest sampling consensus in BRCA. Together, these results highlight UVM, COAD, and BRCA as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Collateral sprouting in absence of injury survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (20). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier20UVM (48)view →
GO function (Protein (mass-spec))Kaplan–Meier6CCRCC (51)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Collateral sprouting in absence of injury activity shows favorable associations in UVM, UCS, SKCM, KIRP and SCLC, but unfavorable associations in THYM. In the UVM Kaplan–Meier curve the low-activity group declines faster, consistent with the favorable association (log-rank p < 0.001). UVM ranks highest by sampling consensus for Collateral sprouting in absence of injury.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
UVMDFSTertileII,III,IV0.8370.362<.00148view →
UCSOSTertileIII,IV0.7080.389.00546view →
SKCMOSTertileAll0.8580.749<.00145view →
KIRPOSQuartileAll0.9770.866.00336view →
THYMDFSMedianII,III,IV0.4790.958.00335view →
SCLCDFSTertileII,III,IV0.9760.342.00633view →
Pink = unfavorable, green = favorable. all 20 lineages →

Tumor vs Normal activity

This table summarizes Collateral sprouting in absence of injury tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 15 cancer types, while mass-spec protein activity shows differences in 5. The strongest signals are in COAD for RNA and CCRCC for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot15COAD (11)view →
GO function (Protein (mass-spec))Box plot5CCRCC (9)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows higher tumor activity across KICH and lower tumor activity in COAD, BLCA, LIHC, LUSC and UCEC. In the COAD box plot, normal samples show higher pathway activity than tumor samples (log2 FC = −0.101, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADMaleII,III,IV−0.101<.00111view →
BLCAMaleIII,IV−0.174<.0018view →
LIHCMaleII,III,IV−0.075<.0018view →
LUSCFemaleII,III,IV−0.137<.0017view →
UCECAllII,III,IV−0.171<.0016view →
KICHFemaleAll+0.111<.0016view →
Pink = higher activity in tumor. all 15 lineages →

Cross-omics associations

This table shows molecular features associated with Collateral sprouting in absence of injury pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in BRCA. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in CNS.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA30,320BRCA (11350)view →
Protein (mass-spec)8,477GBM (2928)view →
Protein (mass-spec)
Protein (mass-spec)16,662HNSC (4679)view →
RNA5,746PDAC (1483)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
shRNA
RNA1,428CNS (586)view →
shRNA1,320CNS (245)view →
RNA
Inducing drug1NCI60_ALL (1)view →