Embryonic digestive tract development

Across TCGA patient cohorts, RNA activity of the Embryonic digestive tract development pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are CALD1, FKBP7, and FMNL3, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Embryonic digestive tract development activity versus CALD1 in BRCA (Pearson r = 0.48).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	CALD1 →	+0.488	+0.040	<.001	<.001	3	7
OV	FKBP7 →	+0.477	+0.037	.001	.001	3	7
PDAC	FMNL3 →	+0.306	+0.038	<.001	<.001	3	7
BRCA	TGFB1I1 →	+0.689	+0.046	<.001	<.001	3	7
BRCA	TLN2 →	+0.518	+0.038	<.001	<.001	3	7
BRCA	CSRP1 →	+0.436	+0.035	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0048566 vs CALD1 — BRCA

Explore this scatter interactively →