Axial mesoderm development

pathway activity — cross-omics
GO:0048318Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Axial mesoderm development pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CYP2A6, PDC-AS1, and LINC02668, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCACYP2A6 →+1.609+0.430<.001.00834
HNSCPDC-AS1 →-0.540-0.586.001.00833
GBMLINC02668 →-0.138-0.691.003.00333
OVDOK1 →+0.452+0.458.005.00833
OVPOLR2E →+0.386+0.586.008.00524
HNSCTUBB1 →-0.331-0.462<.001.00333
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration