Membrane lipid biosynthetic process

pathway activity — cross-omics
GO:0046467Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Membrane lipid biosynthetic process pathway is significantly associated with the protein abundance of multiple proteins, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are RPL5, NCAPD2, and RPS3A, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVRPL5 →-0.219-0.025<.001.00238
GBMNCAPD2 →-0.464-0.030<.001<.00138
LUADRPS3A →-0.200-0.026.002.00137
OVRPS5 →-0.293-0.026.003.00337
OVSRRM2_S1132 →-0.823-0.026<.001.00137
GBMTAF2 →-0.302-0.057<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration