Membrane lipid biosynthetic process

pathway activity — cross-omics
GO:0046467Cross-omicsPROTEIN-MS → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Membrane lipid biosynthetic process pathway is significantly associated with the protein abundance of multiple proteins, with the UCEC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are TAPT1, RNF170, and SACM1L, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECTAPT1 →+0.660+0.383<.001.00234
PDACRNF170 →+0.555+0.464.001.00433
UCECSACM1L →+0.489+0.405<.001.00133
UCECSEC61A1 →+0.617+0.602<.001<.00133
PDACATP2A2 →+0.495+0.457<.001.00333
UCECSTT3B_S498 →+0.817+0.550<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration