Negative regulation of mitotic cell cycle

Across TCGA patient cohorts, RNA activity of the Negative regulation of mitotic cell cycle pathway is significantly associated with the RNA expression of multiple genes, with the COAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are SEMA3B, KHK, and PTGR2, each associated with the pathway in up to 1 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of mitotic cell cycle activity versus SEMA3B in COAD (Pearson r = -0.30).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	SEMA3B →	-1.248	-0.555	.003	.006	3	1
COAD	KHK →	-0.525	-0.494	.006	.008	3	1
COAD	PTGR2 →	+0.335	+0.608	.003	.002	3	1
COAD	WASH2P →	-0.663	-0.556	.001	.005	3	1
COAD	CIB4 →	+0.176	+0.534	.008	.005	3	1
COAD	LDLRAP1 →	-0.819	-0.638	<.001	.006	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0045930 vs SEMA3B — COAD

Explore this scatter interactively →