Negative regulation of membrane potential

pathway activity — cross-omics
GO:0045837Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Negative regulation of membrane potential pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are C4A, RPL12P41, and CYSLTR1, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of membrane potential activity versus C4A in BRCA (Pearson r = 0.23).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAC4A →+1.786+0.626<.001.00134
BRCARPL12P41 →-1.186-0.569<.001.00733
CCRCCCYSLTR1 →-0.320-0.294.007.00533
LSCCCARD8 →+0.324+0.615<.001.00133
LSCCSP140 →+0.528+0.457<.001.00333
GBMGPN1 →-0.281-0.123<.001<.00124
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0045837 vs C4A — BRCA

Per-sample scatter of Negative regulation of membrane potential activity vs C4A in BRCA.

Explore this scatter interactively →

Exploration