Positive regulation of myoblast differentiation

pathway activity — cross-omics
GO:0045663Cross-omicsSHRNA → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Positive regulation of myoblast differentiation pathway is significantly associated with the RNA expression of multiple genes, with the LUNG_NSCLC_LUSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are P3H1, MARVELD2, and VIM, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, P3H1 grouped by Positive regulation of myoblast differentiation-low versus -high activity in LUNG_NSCLC_LUSC.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUSCP3H1 →-1.701-0.327.003<.00136
LUNG_SCLCMARVELD2 →+1.698+0.340.004.00536
LUNG_NSCLC_LUSCVIM →-5.309-0.319<.001<.00136
LUNG_NSCLC_LUADFLOT1 →-0.625-0.290.001.00936
LUNG_NSCLC_LUSCPOLK →-1.058-0.352.006<.00135
SOFT_TISSUELRP1 →-2.059-0.342<.001.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

P3H1 by Positive regulation of myoblast differentiation activity — LUNG_NSCLC_LUSC

Box plot of P3H1 in Positive regulation of myoblast differentiation-low vs -high samples in LUNG_NSCLC_LUSC.

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Exploration