Plasma membrane fusion

pathway activity — cross-omics
GO:0045026Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Plasma membrane fusion pathway is significantly associated with the RNA expression of multiple genes, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are SCN7A, FBLN5, and ABCA9, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCSCN7A →+0.978+0.279<.001<.00136
OVFBLN5 →+0.667+0.100.005.00636
OVABCA9 →+1.032+0.173<.001<.00136
OVA2M →+1.001+0.130.002.00436
OVCOL14A1 →+1.305+0.140<.001<.00136
PDACLINC02884 →+0.450+0.128.001.00336
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration