Obsolete histone H3 acetylation

pathway activity — cross-omics
GO:0043966Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Obsolete histone H3 acetylation pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are SIN3A, WRNIP1, and ZNF638, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMSIN3A →+0.255+0.052.003<.00138
OVWRNIP1 →+0.509+0.037.005.00337
HNSCZNF638 →+0.241+0.060<.001<.00137
GBMHCFC1 →+0.228+0.056<.001<.00137
CCRCCAPEX1 →+0.349+0.049<.001<.00137
UCECMEN1 →+0.408+0.087<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration