Obsolete regulation of phosphatidylinositol 3-kinase activity

pathway activity — cross-omics
GO:0043551Cross-omicsSHRNA → SHRNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Obsolete regulation of phosphatidylinositol 3-kinase activity pathway is significantly associated with the shRNA dependency of multiple genes, with the PANCREAS cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are RUBCN, WDR91, and AGAP2, each associated with the pathway in up to 11 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASRUBCN →-0.325-1.633<.001<.001311
BONEWDR91 →-0.490-1.839<.001<.00137
BLOOD_LymphomaAGAP2 →-0.456-2.276.003<.00136
BLOOD_LymphomaPIK3R3 →-0.185-1.484.002.00536
SOFT_TISSUEWDR81 →-0.330-1.503<.001<.00136
LARGE_INTESTINEPIK3R1 →-0.221-1.228<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration