Establishment of mitotic spindle localization

pathway activity — cross-omics
GO:0040001Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Establishment of mitotic spindle localization pathway is significantly associated with the RNA expression of multiple genes, with the STOMACH cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MPV17L2, GRINA, and RAB3A, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Establishment of mitotic spindle localization activity versus MPV17L2 in STOMACH (Pearson r = -0.54).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STOMACHMPV17L2 →-1.004-0.218<.001<.00135
BONEGRINA →-1.626-0.196.009.00725
STOMACHRAB3A →-1.398-0.212.002.00434
STOMACHMAD2L2 →-1.538-0.290.004.00434
STOMACHEPS8L1 →+1.970+0.208.007.00534
STOMACHBCL2L1 →+1.138+0.204.008.00634
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0040001 vs MPV17L2 — STOMACH

Per-sample scatter of Establishment of mitotic spindle localization activity vs MPV17L2 in STOMACH.

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Exploration