Chondrocyte proliferation

pathway activity — cross-omics
GO:0035988Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Chondrocyte proliferation pathway is significantly associated with the RNA expression of multiple genes, with the PDAC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are DCBLD2, ADAM12, and SPARC, each associated with the pathway in up to 9 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Chondrocyte proliferation activity versus DCBLD2 in PDAC (Pearson r = 0.47).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACDCBLD2 →+0.988+0.324<.001<.00139
BRCAADAM12 →+1.522+0.736<.001<.00137
BRCASPARC →+1.269+0.913<.001<.00136
BRCATNFAIP6 →+1.001+0.842<.001<.00136
BRCASPOCD1 →+1.018+0.825<.001<.00136
BRCASPOCK1 →+1.054+0.651.002.00236
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0035988 vs DCBLD2 — PDAC

Per-sample scatter of Chondrocyte proliferation activity vs DCBLD2 in PDAC.

Explore this scatter interactively →

Exploration