Interleukin-4-mediated signaling pathway

Across TCGA patient cohorts, RNA activity of the Interleukin-4-mediated signaling pathway pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are RIN3, SAMSN1_S107, and SAMSN1_S23, each associated with the pathway in up to 10 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Interleukin-4-mediated signaling pathway activity versus RIN3 in GBM (Pearson r = 0.70).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	RIN3 →	+0.473	+0.175	<.001	<.001	3	10
GBM	SAMSN1_S107 →	+0.860	+0.193	<.001	<.001	3	10
LSCC	SAMSN1_S23 →	+0.809	+0.118	<.001	<.001	3	10
GBM	SASH3 →	+0.599	+0.198	<.001	<.001	3	10
OV	SERPINB9 →	+0.601	+0.090	<.001	<.001	3	10
GBM	SKAP2 →	+0.825	+0.201	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0035771 vs RIN3 — GBM

Explore this scatter interactively →