Obsolete calcium-mediated signaling using intracellular calcium source

pathway activity — cross-omics
GO:0035584Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Obsolete calcium-mediated signaling using intracellular calcium source pathway is significantly associated with the RNA expression of multiple genes, with the PDAC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CXCR1, HBB, and HBA2, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACCXCR1 →+0.857+0.253.005<.00137
BRCAHBB →+1.763+0.242.001.00237
OVHBA2 →+1.723+0.219<.001<.00137
PDACHBA1 →+1.008+0.183<.001.00236
LSCCFCGR3B →+1.066+0.184<.001<.00135
UCECICAM2 →+0.547+0.186.002.00235
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration