Negative regulation of myosin-light-chain-phosphatase activity

pathway activity — cross-omics
GO:0035509Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Negative regulation of myosin-light-chain-phosphatase activity pathway is significantly associated with the RNA expression of multiple genes, with the HNSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are TSPAN4, ZC2HC1C, and SIRPB2, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCTSPAN4 →+0.766+0.142<.001.00434
LSCCZC2HC1C →-0.319-0.546.001.00533
UCECSIRPB2 →+0.605+0.510.007.00133
UCECMILR1 →+0.755+0.335<.001.00833
COADTRIM3 →+0.403+0.639.003.00233
BRCASTX4 →+0.535+0.234.003.00433
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration