Regulation of myosin-light-chain-phosphatase activity

pathway activity — cross-omics
GO:0035507Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of myosin-light-chain-phosphatase activity pathway is significantly associated with the RNA expression of multiple genes, with the COAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are COLEC12, NAALADL1, and HSD17B6, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADCOLEC12 →+0.676+0.452.009<.00134
BRCANAALADL1 →+0.375+0.491.005<.00134
BRCAHSD17B6 →+0.693+0.525.003.00534
BRCALINC01686 →+0.221+0.497.006<.00134
LUADMRC1 →+0.466+0.104.006.00434
UCECLRCH2 →+0.800+0.549.001.00533
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

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