Centromere complex assembly

pathway activity — cross-omics
GO:0034508Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Centromere complex assembly pathway is significantly associated with the protein abundance of multiple proteins, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are RFC1_S368, RFC1_T506, and RFC2, each associated with the pathway in up to 10 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADRFC1_S368 →+1.084+0.143<.001<.001310
LUADRFC1_T506 →+1.330+0.145<.001<.001310
LSCCRFC2 →+0.441+0.066<.001<.001310
LSCCRFC4 →+0.501+0.067<.001<.001310
LUADRPL12_S38 →+1.296+0.130<.001<.001310
LUADRRM2 →+1.022+0.145<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration