Nucleoside bisphosphate biosynthetic process

pathway activity — cross-omics
GO:0033866Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Nucleoside bisphosphate biosynthetic process pathway is significantly associated with the protein abundance of multiple proteins, with the PDAC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are FOSL2_S200, FOSL2, and PLEKHA7, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACFOSL2_S200 →-0.555-0.036<.001<.00137
LSCCFOSL2 →-0.457-0.039<.001<.00137
GBMPLEKHA7 →+0.571+0.052<.001<.00136
HNSCDDAH1 →+0.745+0.057<.001<.00136
GBMFN3K →+0.569+0.058<.001<.00136
HNSCMAP4K5 →-0.387-0.060.001.00636
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration