Mammary gland epithelial cell proliferation

pathway activity — cross-omics
GO:0033598Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Mammary gland epithelial cell proliferation pathway is significantly associated with the RNA expression of multiple genes, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are WDR74, ICAM2, and MTBP, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCWDR74 →+0.514+0.627<.001.00133
LSCCICAM2 →-0.467-0.556.004.00433
LSCCMTBP →+0.463+0.469.005.00633
PDACALG1L →+0.593+0.540.002<.00133
PDACBAIAP2L1 →+0.448+0.493.002<.00133
HNSCPPFIA1 →+0.915+0.456<.001.00533
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration