Positive regulation of peptidyl-serine phosphorylation

pathway activity — cross-omics
GO:0033138Cross-omicsSHRNA → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Positive regulation of peptidyl-serine phosphorylation pathway is significantly associated with the RNA expression of multiple genes, with the LUNG_NSCLC_LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are DRAM1, PRR14, and TBC1D5, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, DRAM1 grouped by Positive regulation of peptidyl-serine phosphorylation-low versus -high activity in LUNG_NSCLC_LUAD.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADDRAM1 →-0.797-0.638.004.00135
SOFT_TISSUEPRR14 →-0.850-1.201.001.00135
BREASTTBC1D5 →-1.009-1.092.003<.00134
BREASTSLC9B2 →-1.321-0.892.002.00534
SOFT_TISSUECFAP97 →-0.982-1.906.002<.00134
BREASTKBTBD6 →-0.615-0.872.003.00434
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

DRAM1 by Positive regulation of peptidyl-serine phosphorylation activity — LUNG_NSCLC_LUAD

Box plot of DRAM1 in Positive regulation of peptidyl-serine phosphorylation-low vs -high samples in LUNG_NSCLC_LUAD.

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Exploration