Interleukin-6 production

pathway activity — cross-omics
GO:0032635Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Interleukin-6 production pathway is significantly associated with the RNA expression of multiple genes, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CLEC7A, GZMK, and ST8SIA4, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCCLEC7A →+0.878+0.281<.001<.00138
LSCCGZMK →+0.766+0.266<.001<.00137
LSCCST8SIA4 →+0.633+0.250<.001<.00137
GBMARHGAP9 →+0.899+0.363<.001<.00137
GBMAIF1 →+0.968+0.297<.001<.00137
GBMSIGLEC10 →+1.034+0.262<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration