Interleukin-17 production

pathway activity — cross-omics
GO:0032620Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Interleukin-17 production pathway is significantly associated with the RNA expression of multiple genes, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are PTPRC, NCF1, and BIN2, each associated with the pathway in up to 10 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCPTPRC →+1.212+1.135<.001<.001310
BRCANCF1 →+0.747+1.050<.001<.001310
UCECBIN2 →+0.708+0.805.006.00139
BRCATRBV20-1 →+1.011+0.829<.001.00339
BRCASIT1 →+0.965+0.971<.001<.001210
LSCCLINC01857 →+0.982+0.910<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration