Regulation of nervous system process

Across TCGA patient cohorts, RNA activity of the Regulation of nervous system process pathway is significantly associated with the protein abundance of multiple proteins, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are C1orf35, RNPS1, and RPP40, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of nervous system process activity versus C1orf35 in OV (Pearson r = -0.38).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	C1orf35 →	-0.388	-0.025	.002	.004	3	7
GBM	RNPS1 →	-0.229	-0.043	<.001	<.001	3	6
LSCC	RPP40 →	-0.300	-0.032	<.001	<.001	3	6
GBM	RRP15 →	-0.437	-0.055	<.001	<.001	3	6
GBM	SEPTIN4 →	+0.611	+0.040	<.001	<.001	3	6
LSCC	SETDB1 →	-0.141	-0.029	.002	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0031644 vs C1orf35 — OV

Explore this scatter interactively →