Negative regulation of microtubule polymerization or depolymerization

Across TCGA patient cohorts, RNA activity of the Negative regulation of microtubule polymerization or depolymerization pathway is significantly associated with the RNA expression of multiple genes, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MAP1B, FAM171B, and UCHL1, each associated with the pathway in up to 9 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of microtubule polymerization or depolymerization activity versus MAP1B in LSCC (Pearson r = 0.76).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	MAP1B →	+1.888	+0.924	<.001	<.001	3	9
HNSC	FAM171B →	+0.996	+0.905	<.001	<.001	3	8
CCRCC	UCHL1 →	+2.067	+0.806	<.001	.001	3	8
OV	CHROMR →	+0.662	+0.732	.001	.002	3	7
UCEC	TTLL7 →	+1.190	+0.723	<.001	.003	3	6
HNSC	VGLL4 →	+0.619	+0.914	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0031111 vs MAP1B — LSCC

Explore this scatter interactively →